| Protein ZmbHLH62 | |
|---|---|
|
ZmbHLH62 is a protein in the bHLH family.
|
|
| Information | |
| TF Name: | ZmbHLH62 |
| Species: | Maize |
| TF Family: | bHLH |
| Gene Name(Synonym): | BHLH62 |
| Uniprot ID: | K7UZ90 |
| Subgenome: | 2 |
Protein ZmbHLH62
ZmbHLH62 is a protein in the bHLH family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00010 | |
| Zm00001eb337860_T002 |  |
| Zm00001eb337860_T001 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d008853 | DAPseq |  |
sequence | fimo | position |
| Zm00001d008853 | DAPseq |  |
sequence | fimo | position |
| Zm00001d008853 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d008853 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmbHLH62 is the regulator
Interactions where ZmbHLH62 is the target
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Zm00001eb337860_T002 from maize genome v5
Amino Acid Sequence
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MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00010 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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TGCTTCTCTTCTCCTGTGGTAGTCG...
TGCTTCTCTTCTCCTGTGGTAGTCGTCTAGCTCGTCACTATTTGAAACTGGCCGGCGTTGTTAAAAAGAAGAACCAGGTAGTACGATAGCATACATGGACATGGATAGCGGCAGCTGGCTCCATGGCTATGCCACCACCAACGCCAGCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCGGCAGCAGCTGCAGCCCTGCAGAGCAGCAGCAGTGCATGGAGGACGAGCAGCAGCAGTTTCTCGTCAGCTCGCAGATTCAGCACCACCTCAACCAGATCAGCATGCGCATGAACATGGACGACGAAGCAGCAGTCGTCTACCACATGTCTTCCAACGGCGGTGCCACCGCCATCGACATGCACGACCCTATCGTGGACGGCCTCCTCGACGACCCGCACCACGGCGCCGGCGGCCGCGCCTGCAGCAGCTTCCCTTCGTCGTCGTCGTGCTCCTCGCTCTCGCTGCCTGCTGCCTCTGCATCCCTCTCCTGCAGCCCCGACGACCCCGACAGCTCCTCGGCGCATCATATCCTCGCCGCGCCGGCCGCGGGCGGCGGCAACCAGCAGTACCCGGAGGTCTCCTCACACGTGCCGTTATTACCACCACCACCACCACCACCCGTCGTGCCATCTTACGACCACCACCACCAGTACACCGACCTTCACGCGCCGGCGCCGGCCAAACCCACCGGTGCGTTCAAGCACTACGCGCGGCACCTTGGGCCGAAGAGGCCGCCTAAGCCCGGCGCGTGCGGGCAGCGGATGTTCAAGACGGCCATGTCGGTGCTGTCCAAGATGCACGTGGCGGCGAGGTACAGCCAACAGCAGTACTACTACCAGGCGGCCGCTGCCGCTGAGGCGGCGCAGCCGCCGCCGTCGGTGAACCAGCTGCAGCACATGTTCTCGGAGCGCAAGCGGCGAGAGAAGCTCAACGACAGCTTCCACGCCCTCAAGGCAGCCCTTCCGCCCGGCGCCAAAAAGGACAAGACGTCGATACTGATCAGGGCAAGGGACTACGTGAGGTCACTGGAGGCCAAGGTGGCCGAGCTGGAGGAGAAGAACAAGTCGCTCGAGTCGCGGCTGACCCGCCGCACGGACGGCAGCAGTGACGACGACGACAACGGCTCCGGCGAGACGACGAAGGTGGAGGTCGAGATAACCAGGACGGCGAACGAAGAACTCTGCACGGTGAAGATAGAGGTGAGATCGCCGCCGGCGGCGGCGGCGTCGCCGTGCAATAGGACTGACGTGGTGGTCAGGACGCTCCAGTGCCTGAAAGAGCAGATCGGAGATGGCGTCAGCCTGGTGGCAATGAGCACCAGCGGCGGCGCTGAGCCGGCGGCTACCGGAGTGAAGAACGCCTTTCCACGAGCTGTCCTGACGATGCAGATCAAGGTATATACTCCACCATCCAATCTGTCCCACATGACATGACGAGCGATCG
GRMZM2G333582_T01 from maize genome v3
Amino Acid Sequence
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MAMPPPTPAATTASCAATLPAAEIQDAFLSIDMHTSMQISMRMNMDDEAAVVYHMSSNGGATAIDMHDPIVDGLLDDPHH
GAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEVSSHVPLLPPPPPPPVVPSYDH
HHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYSQQQYYYQAAAAAEAAQPPPSV
NQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEKNKSLESRLTRRTDGSSDDDDN
GSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGVSLVAMSTSGGAEPAATGVKNA
FPRAVLTMQIKSPGTDWEEQPVKDAVAKVVADALTTTTTPPLPPAAATTVPPAASPGLLINDSSSANNSLTIRPAIMK
Nucleotide Sequence
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ATGGCTATGCCACCACCAACGCCAG...
ATGGCTATGCCACCACCAACGCCAGCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCGGCAGCAGAGATCCAGGACGCATTCTTATCGATCGACATGCACACGTCCATGCAGATCAGCATGCGCATGAACATGGACGACGAAGCAGCAGTCGTCTACCACATGTCTTCCAACGGCGGTGCCACCGCCATCGACATGCACGACCCTATCGTGGACGGCCTCCTCGACGACCCGCACCACGGCGCCGGCGGCCGCGCCTGCAGCAGCTTCCCTTCGTCGTCGTCGTGCTCCTCGCTCTCGCTGCCTGCTGCCTCTGCATCCCTCTCCTGCAGCCCCGACGACCCCGACAGCTCCTCGGCGCATCATATCCTCGCCGCGCCGGCCGCGGGCGGCGGCAACCAGCAGTACCCGGAGGTCTCCTCACACGTGCCGTTATTACCACCACCACCACCACCACCCGTCGTGCCATCTTACGACCACCACCACCAGTACACCGACCTTCACGCGCCGGCGCCGGCCAAACCCACCGGTGCGTTCAAGCACTACGCGCGGCACCTTGGGCCGAAGAGGCCGCCTAAGCCCGGCGCGTGCGGGCAGCGGATGTTCAAGACGGCCATGTCGGTGCTGTCCAAGATGCACGTGGCGGCGAGGTACAGCCAACAGCAGTACTACTACCAGGCGGCCGCTGCCGCTGAGGCGGCGCAGCCGCCGCCGTCGGTGAACCAGCTGCAGCACATGTTCTCGGAGCGCAAGCGGCGAGAGAAGCTCAACGACAGCTTCCACGCCCTCAAGGCAGCCCTTCCGCCCGGCGCCAAAAAGGACAAGACGTCGATACTGATCAGGGCAAGGGACTACGTGAGGTCACTGGAGGCCAAGGTGGCCGAGCTGGAGGAGAAGAACAAGTCGCTCGAGTCGCGGCTGACCCGCCGCACGGACGGCAGCAGTGACGACGACGACAACGGCTCCGGCGAGACGACGAAGGTGGAGGTCGAGATAACCAGGACGGCGAACGAAGAACTCTGCACGGTGAAGATAGAGGTGAGATCGCCGCCGGCGGCGGCGGCGTCGCCGTGCAATAGGACTGACGTGGTGGTCAGGACGCTCCAGTGCCTGAAAGAGCAGATCGGAGATGGCGTCAGCCTGGTGGCAATGAGCACCAGCGGCGGCGCTGAGCCGGCGGCTACCGGAGTGAAGAACGCCTTTCCACGAGCTGTCCTGACGATGCAGATCAAGTCGCCAGGAACCGACTGGGAGGAGCAGCCGGTCAAGGACGCCGTGGCCAAGGTCGTCGCCGACGCGCTGACGACGACGACGACGCCGCCACTGCCACCCGCGGCGGCCACCACCGTACCGCCAGCTGCTTCGCCGGGGCTTCTCATCAACGACTCGTCATCAGCTAATAATTCATTAACAATCCGGCCGGCCATAATGAAATAG
Zm00001d008853_T001 from maize genome v4
Amino Acid Sequence
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MDMDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLISMRMNMDDEAAVVYHMSSNGGATAIDMHD
PIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEVSSHVPLLPP
PPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYSQQQYYYQAA
AAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEKNKSLESRLT
RRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGVSLVAMSTSG
GAEPAATGVKNAFPRAVLTMQIKSPGTDWEEQPVKDAVAKVVADALTTTTTPPLPPAAATTVPPAASPGLLINDSSSANN
SLTIRPAIMK
Nucleotide Sequence
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TGCATCCAGACCACGGGCGTTCCTC...
TGCATCCAGACCACGGGCGTTCCTCCATATGTCCATCTCTGATCACTATGCAGCTTTGGTAGATGCTTCTCTTCTCCTGTGGTAGTCGTCTAGCTCGTCACTATTTGAAACTGGCCGGCGTTGTTAAAAAGAAGAACCAGGTAGTACGATAGCATACATGGACATGGATAGCGGCAGCTGGCTCCATGGCTATGCCACCACCAACGCCAGCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCGGCAGCAGCTGCAGCCCTGCAGAGCAGCAGCAGTGCATGGAGGACGAGCAGCAGCAGTTTCTCATCAGCATGCGCATGAACATGGACGACGAAGCAGCAGTCGTCTACCACATGTCTTCCAACGGCGGTGCCACCGCCATCGACATGCACGACCCTATCGTGGACGGCCTCCTCGACGACCCGCACCACGGCGCCGGCGGCCGCGCCTGCAGCAGCTTCCCTTCGTCGTCGTCGTGCTCCTCGCTCTCGCTGCCTGCTGCCTCTGCATCCCTCTCCTGCAGCCCCGACGACCCCGACAGCTCCTCGGCGCATCATATCCTCGCCGCGCCGGCCGCGGGCGGCGGCAACCAGCAGTACCCGGAGGTCTCCTCACACGTGCCGTTATTACCACCACCACCACCACCACCCGTCGTGCCATCTTACGACCACCACCACCAGTACACCGACCTTCACGCGCCGGCGCCGGCCAAACCCACCGGTGCGTTCAAGCACTACGCGCGGCACCTTGGGCCGAAGAGGCCGCCTAAGCCCGGCGCGTGCGGGCAGCGGATGTTCAAGACGGCCATGTCGGTGCTGTCCAAGATGCACGTGGCGGCGAGGTACAGCCAACAGCAGTACTACTACCAGGCGGCCGCTGCCGCTGAGGCGGCGCAGCCGCCGCCGTCGGTGAACCAGCTGCAGCACATGTTCTCGGAGCGCAAGCGGCGAGAGAAGCTCAACGACAGCTTCCACGCCCTCAAGGCAGCCCTTCCGCCCGGCGCCAAAAAGGACAAGACGTCGATACTGATCAGGGCAAGGGACTACGTGAGGTCACTGGAGGCCAAGGTGGCCGAGCTGGAGGAGAAGAACAAGTCGCTCGAGTCGCGGCTGACCCGCCGCACGGACGGCAGCAGTGACGACGACGACAACGGCTCCGGCGAGACGACGAAGGTGGAGGTCGAGATAACCAGGACGGCGAACGAAGAACTCTGCACGGTGAAGATAGAGGTGAGATCGCCGCCGGCGGCGGCGGCGTCGCCGTGCAATAGGACTGACGTGGTGGTCAGGACGCTCCAGTGCCTGAAAGAGCAGATCGGAGATGGCGTCAGCCTGGTGGCAATGAGCACCAGCGGCGGCGCTGAGCCGGCGGCTACCGGAGTGAAGAACGCCTTTCCACGAGCTGTCCTGACGATGCAGATCAAGTCGCCAGGAACCGACTGGGAGGAGCAGCCGGTCAAGGACGCCGTGGCCAAGGTCGTCGCCGACGCGCTGACGACGACGACGACGCCGCCACTGCCACCCGCGGCGGCCACCACCGTACCGCCAGCTGCTTCGCCGGGGCTTCTCATCAACGACTCGTCATCAGCTAATAATTCATTAACAATCCGGCCGGCCATAATGAAATAGGGGGCGTTGCCCTTTTGGTCAAAAAAAAAAACAATCCGGCCGGCCGGCGG
Zm00001eb337860_T001 from maize genome v5
Amino Acid Sequence
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MDSGSWLHGYATTNASGNNGFMCGYAAGSSCSPAEQQQCMEDEQQQFLVSSQIQHHLNQISMRMNMDDEAAVVYHMSSNG
GATAIDMHDPIVDGLLDDPHHGAGGRACSSFPSSSSCSSLSLPAASASLSCSPDDPDSSSAHHILAAPAAGGGNQQYPEV
SSHVPLLPPPPPPPVVPSYDHHHQYTDLHAPAPAKPTGAFKHYARHLGPKRPPKPGACGQRMFKTAMSVLSKMHVAARYS
QQQYYYQAAAAAEAAQPPPSVNQLQHMFSERKRREKLNDSFHALKAALPPGAKKDKTSILIRARDYVRSLEAKVAELEEK
NKSLESRLTRRTDGSSDDDDNGSGETTKVEVEITRTANEELCTVKIEVRSPPAAAASPCNRTDVVVRTLQCLKEQIGDGV
SLVAMSTSGGAEPAATGVKNAFPRAVLTMQIKVYTPPSNLSHMT
Nucleotide Sequence
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TGCTTCTCTTCTCCTGTGGTAGTCG...
TGCTTCTCTTCTCCTGTGGTAGTCGTCTAGCTCGTCACTATTTGAAACTGGCCGGCGTTGTTAAAAAGAAGAACCAGGTAGTACGATAGCATACATGGACATGGATAGCGGCAGCTGGCTCCATGGCTATGCCACCACCAACGCCAGCGGCAACAACGGCTTCATGTGCGGCTACGCTGCCGGCAGCAGCTGCAGCCCTGCAGAGCAGCAGCAGTGCATGGAGGACGAGCAGCAGCAGTTTCTCGTCAGCTCGCAGATTCAGCACCACCTCAACCAGATCAGCATGCGCATGAACATGGACGACGAAGCAGCAGTCGTCTACCACATGTCTTCCAACGGCGGTGCCACCGCCATCGACATGCACGACCCTATCGTGGACGGCCTCCTCGACGACCCGCACCACGGCGCCGGCGGCCGCGCCTGCAGCAGCTTCCCTTCGTCGTCGTCGTGCTCCTCGCTCTCGCTGCCTGCTGCCTCTGCATCCCTCTCCTGCAGCCCCGACGACCCCGACAGCTCCTCGGCGCATCATATCCTCGCCGCGCCGGCCGCGGGCGGCGGCAACCAGCAGTACCCGGAGGTCTCCTCACACGTGCCGTTATTACCACCACCACCACCACCACCCGTCGTGCCATCTTACGACCACCACCACCAGTACACCGACCTTCACGCGCCGGCGCCGGCCAAACCCACCGGTGCGTTCAAGCACTACGCGCGGCACCTTGGGCCGAAGAGGCCGCCTAAGCCCGGCGCGTGCGGGCAGCGGATGTTCAAGACGGCCATGTCGGTGCTGTCCAAGATGCACGTGGCGGCGAGGTACAGCCAACAGCAGTACTACTACCAGGCGGCCGCTGCCGCTGAGGCGGCGCAGCCGCCGCCGTCGGTGAACCAGCTGCAGCACATGTTCTCGGAGCGCAAGCGGCGAGAGAAGCTCAACGACAGCTTCCACGCCCTCAAGGCAGCCCTTCCGCCCGGCGCCAAAAAGGACAAGACGTCGATACTGATCAGGGCAAGGGACTACGTGAGGTCACTGGAGGCCAAGGTGGCCGAGCTGGAGGAGAAGAACAAGTCGCTCGAGTCGCGGCTGACCCGCCGCACGGACGGCAGCAGTGACGACGACGACAACGGCTCCGGCGAGACGACGAAGGTGGAGGTCGAGATAACCAGGACGGCGAACGAAGAACTCTGCACGGTGAAGATAGAGGTGAGATCGCCGCCGGCGGCGGCGGCGTCGCCGTGCAATAGGACTGACGTGGTGGTCAGGACGCTCCAGTGCCTGAAAGAGCAGATCGGAGATGGCGTCAGCCTGGTGGCAATGAGCACCAGCGGCGGCGCTGAGCCGGCGGCTACCGGAGTGAAGAACGCCTTTCCACGAGCTGTCCTGACGATGCAGATCAAGGTATATACTCCACCATCCAATCTGTCCCACATGACATGACGAGCGATCG
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